No, you won't be an employee, unless they offer you some part time work (e.g. research assistant, tutor). The majority of full time PhD students in Australia are on a scholarship, which can sometimes include a 'top-up', either from the uni or industry. A PhD is just a qualification, and afterwards you will need to compete for a job with everyone else, unless you are offered a postdoc. Check out some other threads, where people have obtained their PhD, but are still looking for work 1-3 years later.